HUMAN PROTEINPEDIA 


  1 experimental dataset deposited supporting this annotation
  Protein Name  growth factor receptor-bound protein 2
  Site of Expression   Platelet

  1.            Platform: Mass spectrometry
 
Experimental Details - HuPA_00007
Experiment type Mass spectrometry
Short description Platelet subproteome analysis
Experimental description Commercially available kits were used for crude fractionation of cells into different compartments, such as membranes, cytosol, nucleus and cytoskeleton. Platelet proteome, activated and resting states, was characterized and compared.
Principal Investigator's NameDr. Gerard Cagney
TitleAssistant Professor
E-mailgerard.cagney@ucd.ie
AddressConway Institute
University College Dublin
Belfield, Dublin 4
CountryIreland
Lab URLhttp://proteomics.ucd.ie/index.html
Data submitted byMathew Sullivan
TitleBioInformatics Group Leader
E-mailmatthew.sullivan@ucd.ie
Published/Unpublished Unpublished
Journal name Not applicable
PubMed ID Not applicable
Sample source
Tissue: Platelet [eVOC:EV:0200138]
Cell line:
Source organism Homo sapiens [Taxonomy:9606]
Labeling technique
Protease used Trypsin
Is the sample from in gel Yes
Reduction and Alkylation No
Mass spectrometer
Instrument: LCQ Classic [PSI:1000168]
Vendor: ThermoFinnigan [PSI:1000125]
Ionization method ESI [PSI:1000073]
Fragmentation method CID [PSI:1000133]
Mass tolerance used for database searching (MS) 1.5 Da
Mass tolerance used for database searching (MS/MS) 0.5 Da
Database used for searching RefSeq
Search engine used SEQUEST
Download MS raw dataset  
Download processed files  

   growth factor receptor-bound protein 2 is expressed in Platelet
  Peptide SequenceModifications Peptide Score/Probability Precursor MassCharge StateSequence IdentifierMS/MS Spectrum
1. R.ESESAPGDFSLSVK.F   1 727.1 2 NP_002077 HuPA_S68440
2. K.YFLWVVK.F   1 477.7348022 2 NP_002077 HuPA_S49757
3. K.YFLWVVK.F   1 477.7348022 2 NP_002077 HuPA_S49756
4. K.FNSLNELVDYHR.S   1 753.7683716 2 NP_002077 HuPA_S49586
5. K.FNSLNELVDYHR.S   1 753.7683716 2 NP_002077 HuPA_S49585
6. R.ESESAPGDFSLSVK.F   1 726.7903442 2 NP_002077 HuPA_S49361
7. R.HDGAFLIR.E   1 464.7566528 2 NP_002077 HuPA_S49266
8. K.FGNDVQHFK.V   1 546.7037354 2 NP_002077 HuPA_S48986
9. K.ATADDELSFK.R   1 548.7069092 2 NP_002077 HuPA_S49214
10. K.ATADDELSFK.R   1 548.7069092 2 NP_002077 HuPA_S49213
11. R.HDGAFLIR.E   0.99 465.17 2 NP_002077 HuPA_S68264
12. R.NQQIFLR.D   0.99 459.7145081 2 NP_002077 HuPA_S49283
13. R.NQQIFLR.D   0.99 459.7145081 2 NP_002077 HuPA_S49284
14. R.NQQIFLR.D   0.98 460.16 2 NP_002077 HuPA_S68177
15. R.ESESAPGDFSLSVK.F   0.94 727.35 2 NP_002077 HuPA_S29180
16. K.FGNDVQHFK.V   0.93 546.7037354 2 NP_002077 HuPA_S48987
17. K.ATADDELSFK.R   0.91 548.69 2 NP_002077 HuPA_S68169
18. R.NQQIFLR.D   0.84 460.18 2 NP_002077 HuPA_S29083




Please send any questions or comments about Human Proteinpedia to help
This is a joint project between:
   and