Experimental Details - HuPA_00030
Experiment type Mass spectrometry
Short description Histone modifications analysis
Experimental description Human small cell lung cancer cells exposed to the HDACi PXD101. Triplicate analysis by LC-MS/MS. Data analysis by VEMS software.
Principal Investigator's NameDr. Ole Nørregaard Jensen
AddressUniversity of Southern Denmark
Institute of Biochemistry and Molecular Biology, Campusvej 55,
Odense M, DK- 5230
Published/Unpublished Published
Journal name
PubMed ID 16627869
Sample source
Cell line: SCLC OC-NYH
Source organism Homo sapiens [Taxonomy:9606]
Labeling technique None
Protease used Trypsin
Is the sample from in gel
Reduction and Alkylation yes
Mass spectrometer
Instrument: 1. Q-Tof Ultima [PSI:1000189]
2. Q-Tof micro [PSI:1000188]
Vendor: Waters [PSI:1000126]
Waters [PSI:1000126]
Ionization method ESI [PSI:1000073]
Fragmentation method CID [PSI:1000133]
Mass tolerance used for database searching (MS) 0.6 Da
Mass tolerance used for database searching (MS/MS) 0.6 Da
Database used for searching Human histone database
Search engine used Mascot
Download MS raw dataset  
Download processed files  

Please send any questions or comments about Human Proteinpedia to help
This is a joint project between: