HUMAN PROTEINPEDIA 


Experimental Details - HuPA_00030
Experiment type Mass spectrometry
Short description Histone modifications analysis
Experimental description Human small cell lung cancer cells exposed to the HDACi PXD101. Triplicate analysis by LC-MS/MS. Data analysis by VEMS software.
Principal Investigator's NameDr. Ole Nørregaard Jensen
TitleProfessor
E-mailjenseno@bmb.sdu.dk
AddressUniversity of Southern Denmark
Institute of Biochemistry and Molecular Biology, Campusvej 55,
Odense M, DK- 5230
CountryDenmark
Published/Unpublished Published
Journal name
PubMed ID 16627869
Sample source
Tissue:
Cell line: SCLC OC-NYH
Source organism Homo sapiens [Taxonomy:9606]
Labeling technique None
Protease used Trypsin
Is the sample from in gel
Reduction and Alkylation yes
Mass spectrometer
Instrument: 1. Q-Tof Ultima [PSI:1000189]
2. Q-Tof micro [PSI:1000188]
Vendor: Waters [PSI:1000126]
Waters [PSI:1000126]
Ionization method ESI [PSI:1000073]
Fragmentation method CID [PSI:1000133]
Mass tolerance used for database searching (MS) 0.6 Da
Mass tolerance used for database searching (MS/MS) 0.6 Da
Database used for searching Human histone database
Search engine used Mascot
Download MS raw dataset  
Download processed files  



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